Function : SRY-box 2
Description : This intronless gene encodes a member of the SRY-related HMG-box (SOX) family of transcription factors involved in the regulation of embryonic development and in the determination of cell fate. The product of this gene is required for stem-cell maintenance in the central nervous system, and also regulates gene expression in the stomach. Mutations in this gene have been associated with optic nerve hypoplasia and with syndromic microphthalmia, a severe form of structural eye malformation. This gene lies within an intron of another gene called SOX2 overlapping transcript (SOX2OT). [provided by RefSeq, Jul 2008]
| Super Class | Other all-alpha-helical DNA-binding domains |
| Class | High-mobility group (HMG) domain factors |
| Family | SOX-related factors |
| Sub Family | Group B |
| Ensembl | ENSG00000181449 |
| RefSeq | NP_003097 |
| Uniprot | P48431 |
| Aliases | ANOP3, MCOPS3 |
| UCSC Gene coordinates | chr3:181711923-181714435 |
| JASPAR | MA0143.3 |
| Wikipedia | SOX2 |
| WikiGenes | SOX2 |
| Transcription Factor Encylopedia | SOX2 |
| GeneCards | SOX2 |
| FactorBook | SOX2 |
| Datasets quality |
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DNA constraint | Motifs | |
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UCSC genome browser |
| All peaks | BED file | ![]() |
| Merged peaks (non-redundant peaks) |
BED file | ![]() |
| Peak sequences | FASTA file |
| Datasets quality |
|
|
DNA constraint | Motifs | |
|
UCSC genome browser |
| All peaks | BED file | ![]() |
| Merged peaks (non-redundant peaks) |
BED file | ![]() |
| Peak sequences | FASTA file |