ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

SP2

Function : Sp2 transcription factor
Description : This gene encodes a member of the Sp subfamily of Sp/XKLF transcription factors. Sp family proteins are sequence-specific DNA-binding proteins characterized by an amino-terminal trans-activation domain and three carboxy-terminal zinc finger motifs. This protein contains the least conserved DNA-binding domain within the Sp subfamily of proteins, and its DNA sequence specificity differs from the other Sp proteins. It localizes primarily within subnuclear foci associated with the nuclear matrix, and can activate or in some cases repress expression from different promoters. [provided by RefSeq, Jul 2008]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class C2H2 zinc finger factors
Family Three-zinc finger Krüppel-related factors
Sub Family Sp1-like factors

External references

Ensembl ENSG00000167182
RefSeq NP_003101
Uniprot Q02086
Aliases -
UCSC Gene coordinates chr17:47896031-47932270

External Links

JASPAR MA0516.1
Wikipedia SP2
WikiGenes SP2
Transcription Factor Encylopedia SP2    
GeneCards SP2
FactorBook SP2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for SP2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for SP2