ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

SREBF2

Function : sterol regulatory element binding transcription factor 2
Description : This gene encodes a member of the a ubiquitously expressed transcription factor that controls cholesterol homeostasis by regulating transcription of sterol-regulated genes. The encoded protein contains a basic helix-loop-helix-leucine zipper (bHLH-Zip) domain and binds the sterol regulatory element 1 motif. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]

Classification  

Super Class Basic domains
Class Basic helix-loop-helix factors (bHLH)
Family bHLH-ZIP factors
Sub Family SREBP factors

External references

Ensembl ENSG00000198911
RefSeq NP_004590
Uniprot Q12772
Aliases SREBP-2, SREBP2, bHLHd2
UCSC Gene coordinates chr22:41833078-41907307

External Links

JASPAR MA0596.1 MA0828.1
Wikipedia SREBF2
WikiGenes SREBF2
Transcription Factor Encylopedia SREBF2    
GeneCards SREBF2
FactorBook SREBF2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for SREBF2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for SREBF2