Function : TAR DNA binding protein
Description : HIV-1, the causative agent of acquired immunodeficiency syndrome (AIDS), contains an RNA genome that produces a chromosomally integrated DNA during the replicative cycle. Activation of HIV-1 gene expression by the transactivator Tat is dependent on an RNA regulatory element (TAR) located downstream of the transcription initiation site. The protein encoded by this gene is a transcriptional repressor that binds to chromosomally integrated TAR DNA and represses HIV-1 transcription. In addition, this protein regulates alternate splicing of the CFTR gene. A similar pseudogene is present on chromosome 20. [provided by RefSeq, Jul 2008]
| Super Class | Unknown |
| Class | Unknown |
| Family | Unknown |
| Sub Family | Unknown |
| Ensembl | ENSG00000120948 |
| RefSeq | NP_031401 |
| Uniprot | Q13148 |
| Aliases | ALS10, TDP-43 |
| UCSC Gene coordinates | chr1:11012621-11030527 |
| JASPAR | TARDBP |
| Wikipedia | TARDBP |
| WikiGenes | TARDBP |
| Transcription Factor Encylopedia | TARDBP |
| GeneCards | TARDBP |
| FactorBook | TARDBP |
| Datasets quality |
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DNA constraint | Motifs | |
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UCSC genome browser |
| All peaks | BED file | ![]() |
| Merged peaks (non-redundant peaks) |
BED file | ![]() |
| Peak sequences | FASTA file |
| Datasets quality |
|
|
DNA constraint | Motifs | |
|
UCSC genome browser |
| All peaks | BED file | ![]() |
| Merged peaks (non-redundant peaks) |
BED file | ![]() |
| Peak sequences | FASTA file |