ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

TCF12

Function : transcription factor 12
Description : The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH) E-protein family that recognizes the consensus binding site (E-box) CANNTG. This encoded protein is expressed in many tissues, among them skeletal muscle, thymus, B- and T-cells, and may participate in regulating lineage-specific gene expression through the formation of heterodimers with other bHLH E-proteins. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined. [provided by RefSeq, Jul 2008]

Classification  

Super Class Basic domains
Class Basic helix-loop-helix factors (bHLH)
Family E2A-related factors
Sub Family None

External references

Ensembl ENSG00000140262
RefSeq NP_001309081
Uniprot Q99081
Aliases CRS3, HEB, HTF4, HsT17266, TCF-12, bHLHb20
UCSC Gene coordinates chr15:56918089-57291260

External Links

JASPAR MA0521.1
Wikipedia TCF12
WikiGenes TCF12
Transcription Factor Encylopedia TCF12    
GeneCards TCF12
FactorBook TCF12


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for TCF12

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for TCF12