ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

TFAP2A

Function : transcription factor AP-2 alpha
Description : The protein encoded by this gene is a transcription factor that binds the consensus sequence 5'-GCCNNNGGC-3'. The encoded protein functions as either a homodimer or as a heterodimer with similar family members. This protein activates the transcription of some genes while inhibiting the transcription of others. Defects in this gene are a cause of branchiooculofacial syndrome (BOFS). Three transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Dec 2009]

Classification  

Super Class Basic domains
Class Basic helix-span-helix factors (bHSH)
Family AP-2
Sub Family None

External references

Ensembl ENSG00000137203
RefSeq NP_003211
Uniprot P05549
Aliases AP-2, AP-2alpha, AP2TF, BOFS, TFAP2
UCSC Gene coordinates chr6:10396676-10419896

External Links

JASPAR MA0003.3 MA0810.1 MA0872.1
Wikipedia TFAP2A
WikiGenes TFAP2A
Transcription Factor Encylopedia TFAP2A    
GeneCards TFAP2A
FactorBook TFAP2A


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for TFAP2A

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for TFAP2A