ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

TFAP4

Function : transcription factor AP-4
Description : Transcription factors of the basic helix-loop-helix-zipper (bHLH-ZIP) family contain a basic domain, which is used for DNA binding, and HLH and ZIP domains, which are used for oligomerization. Transcription factor AP4 activates both viral and cellular genes by binding to the symmetrical DNA sequence CAGCTG (Mermod et al., 1988 [PubMed 2833704]; Hu et al., 1990 [PubMed 2123466]).[supplied by OMIM, Jul 2009]

Classification  

Super Class Basic domains
Class Basic helix-loop-helix factors (bHLH)
Family bHLH-ZIP factors
Sub Family AP-4

External references

Ensembl ENSG00000090447
RefSeq NP_003214
Uniprot Q01664
Aliases AP-4, bHLHc41
UCSC Gene coordinates chr16:4257185-4272999

External Links

JASPAR MA0691.1
Wikipedia TFAP4
WikiGenes TFAP4
Transcription Factor Encylopedia TFAP4    
GeneCards TFAP4
FactorBook TFAP4


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for TFAP4

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for TFAP4