ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

TOP1

Function : DNA topoisomerase I
Description : This gene encodes a DNA topoisomerase, an enzyme that controls and alters the topologic states of DNA during transcription. This enzyme catalyzes the transient breaking and rejoining of a single strand of DNA which allows the strands to pass through one another, thus altering the topology of DNA. This gene is localized to chromosome 20 and has pseudogenes which reside on chromosomes 1 and 22. [provided by RefSeq, Jul 2008]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000198900
RefSeq NP_003277
Uniprot P11387
Aliases TOPI
UCSC Gene coordinates chr20:41028821-41124486

External Links

JASPAR TOP1
Wikipedia TOP1
WikiGenes TOP1
Transcription Factor Encylopedia TOP1    
GeneCards TOP1
FactorBook TOP1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for TOP1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for TOP1