ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

TRIM24

Function : tripartite motif containing 24
Description : The protein encoded by this gene mediates transcriptional control by interaction with the activation function 2 (AF2) region of several nuclear receptors, including the estrogen, retinoic acid, and vitamin D3 receptors. The protein localizes to nuclear bodies and is thought to associate with chromatin and heterochromatin-associated factors. The protein is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains - a RING, a B-box type 1 and a B-box type 2 - and a coiled-coil region. Two alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2008]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000122779
RefSeq NP_056989
Uniprot O15164
Aliases PTC6, RNF82, TF1A, TIF1, TIF1A, TIF1ALPHA, hTIF1
UCSC Gene coordinates chr7:138460333-138585587

External Links

JASPAR TRIM24
Wikipedia TRIM24
WikiGenes TRIM24
Transcription Factor Encylopedia TRIM24    
GeneCards TRIM24
FactorBook TRIM24


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for TRIM24

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for TRIM24