ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

TRIM28

Function : tripartite motif containing 28
Description : The protein encoded by this gene mediates transcriptional control by interaction with the Kruppel-associated box repression domain found in many transcription factors. The protein localizes to the nucleus and is thought to associate with specific chromatin regions. The protein is a member of the tripartite motif family. This tripartite motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. [provided by RefSeq, Jul 2008]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000130726
RefSeq NP_005753
Uniprot Q13263
Aliases KAP1, PPP1R157, RNF96, TF1B, TIF1B
UCSC Gene coordinates chr19:58544468-58550714

External Links

JASPAR TRIM28
Wikipedia TRIM28
WikiGenes TRIM28
Transcription Factor Encylopedia TRIM28
GeneCards TRIM28
FactorBook TRIM28


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for TRIM28

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for TRIM28