ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

TRRAP

Function : transformation/transcription domain associated protein
Description : This gene encodes a large multidomain protein of the phosphoinositide 3-kinase-related kinases (PIKK) family. The encoded protein is a common component of many histone acetyltransferase (HAT) complexes and plays a role in transcription and DNA repair by recruiting HAT complexes to chromatin. Deregulation of this gene may play a role in several types of cancer including glioblastoma multiforme. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Sep 2011]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000196367
RefSeq NP_001231509
Uniprot Q9Y4A5
Aliases PAF350/400, PAF400, STAF40, TR-AP, Tra1
UCSC Gene coordinates chr7:98878489-99013242

External Links

JASPAR TRRAP
Wikipedia TRRAP
WikiGenes TRRAP
Transcription Factor Encylopedia TRRAP    
GeneCards TRRAP
FactorBook TRRAP


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for TRRAP

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for TRRAP