ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

USF2

Function : upstream transcription factor 2, c-fos interacting
Description : This gene encodes a member of the basic helix-loop-helix leucine zipper family of transcription factors. The encoded protein can activate transcription through pyrimidine-rich initiator (Inr) elements and E-box motifs and is involved in regulating multiple cellular processes. [provided by RefSeq, Mar 2016]

Classification  

Super Class Basic domains
Class Basic helix-loop-helix factors (bHLH)
Family bHLH-ZIP factors
Sub Family USF factors

External references

Ensembl ENSG00000105698
RefSeq NP_001308079
Uniprot Q15853
Aliases FIP, bHLHb12
UCSC Gene coordinates chr19:35268977-35279820

External Links

JASPAR MA0526.2
Wikipedia USF2
WikiGenes USF2
Transcription Factor Encylopedia USF2    
GeneCards USF2
FactorBook USF2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for USF2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for USF2