ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

ZBTB16

Function : zinc finger and BTB domain containing 16
Description : This gene is a member of the Krueppel C2H2-type zinc-finger protein family and encodes a zinc finger transcription factor that contains nine Kruppel-type zinc finger domains at the carboxyl terminus. This protein is located in the nucleus, is involved in cell cycle progression, and interacts with a histone deacetylase. Specific instances of aberrant gene rearrangement at this locus have been associated with acute promyelocytic leukemia (APL). Alternate transcriptional splice variants have been characterized. [provided by RefSeq, Jul 2008]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class C2H2 zinc finger factors
Family More than 3 adjacent zinc finger factors
Sub Family unclassified

External references

Ensembl ENSG00000109906
RefSeq NP_005997
Uniprot Q05516
Aliases PLZF, ZNF145
UCSC Gene coordinates chr11:114059575-114256764

External Links

JASPAR ZBTB16
Wikipedia ZBTB16
WikiGenes ZBTB16
Transcription Factor Encylopedia ZBTB16
GeneCards ZBTB16
FactorBook ZBTB16


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for ZBTB16

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for ZBTB16