ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

ZEB1

Function : zinc finger E-box binding homeobox 1
Description : This gene encodes a zinc finger transcription factor. The encoded protein likely plays a role in transcriptional repression of interleukin 2. Mutations in this gene have been associated with posterior polymorphous corneal dystrophy-3 and late-onset Fuchs endothelial corneal dystrophy. Alternatively spliced transcript variants encoding different isoforms have been described.[provided by RefSeq, Mar 2010]

Classification  

Super Class Helix-turn-helix domains
Class Homeo domain factors
Family HD-ZF factors
Sub Family ZEB

External references

Ensembl ENSG00000148516
RefSeq NP_001310578
Uniprot P37275
Aliases AREB6, BZP, DELTAEF1, FECD6, NIL2A, PPCD3, TCF8, ZFHEP, ZFHX1A
UCSC Gene coordinates chr10:31318494-31529813

External Links

JASPAR MA0103.3
Wikipedia ZEB1
WikiGenes ZEB1
Transcription Factor Encylopedia ZEB1    
GeneCards ZEB1
FactorBook ZEB1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for ZEB1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for ZEB1