ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

ZEB2

Function : zinc finger E-box binding homeobox 2
Description : The protein encoded by this gene is a member of the Zfh1 family of 2-handed zinc finger/homeodomain proteins. It is located in the nucleus and functions as a DNA-binding transcriptional repressor that interacts with activated SMADs. Mutations in this gene are associated with Hirschsprung disease/Mowat-Wilson syndrome. Alternatively spliced transcript variants have been found for this gene.[provided by RefSeq, Jan 2010]

Classification  

Super Class Helix-turn-helix domains
Class Homeo domain factors
Family HD-ZF factors
Sub Family ZEB

External references

Ensembl ENSG00000169554
RefSeq NP_055610
Uniprot O60315
Aliases HSPC082, SIP-1, SIP1, SMADIP1, ZFHX1B
UCSC Gene coordinates chr2:144384374-144520390

External Links

JASPAR ZEB2
Wikipedia ZEB2
WikiGenes ZEB2
Transcription Factor Encylopedia ZEB2    
GeneCards ZEB2
FactorBook ZEB2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for ZEB2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for ZEB2