ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

ZNF335

Function : zinc finger protein 335
Description : The protein encoded by this gene enhances transcriptional activation by ligand-bound nuclear hormone receptors. However, it does this not by direct interaction with the receptor, but by direct interaction with the nuclear hormone receptor transcriptional coactivator NRC. The encoded protein may function by altering local chromatin structure. [provided by RefSeq, Jul 2008]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class C2H2 zinc finger factors
Family Factors with multiple dispersed zinc fingers
Sub Family unclassified

External references

Ensembl ENSG00000198026
RefSeq NP_071378
Uniprot Q9H4Z2
Aliases MCPH10, NIF-1, NIF1, NIF2
UCSC Gene coordinates chr20:45948652-45972909

External Links

JASPAR ZNF335
Wikipedia ZNF335
WikiGenes ZNF335
Transcription Factor Encylopedia ZNF335    
GeneCards ZNF335
FactorBook ZNF335


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for ZNF335

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for ZNF335